Publications of SS. Li

Publications of SS. Li

The individual publication lists here have to be considered only in the context of the Bork Group.
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2022 1 publication(s).
7.
Drivers and determinants of strain dynamics following fecal microbiota transplantation.
Schmidt TSB, Li SS, Maistrenko OM, Akanni W, Coelho LP, Dolai S, Fullam A, Glazek AM, Hercog R, Herrema H, Jung F, Kandels S, Orakov A, Thielemann R, von Stetten M, Van Rossum T, Benes V, Borody TJ, de Vos WM, Ponsioen CY, Nieuwdorp M, Bork P
2022 Sep 15; 28(9): 1902-1912. PubMed: 36109636.
Abstract + PDF
2020 1 publication(s).
6.
Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity.
2020 May 11; 14(5): 1247-1259. PubMed: 32047279.
Abstract + PDF
2019 1 publication(s).
5.
Extensive transmission of microbes along the gastrointestinal tract.
Schmidt TSB, Hayward MR, Coelho LP, Li SS, Costea PI, Voigt AY, Wirbel J, Maistrenko OM, Alves RJ, Bergsten E, de Beaufort C, Sobhani I, Heintz-Buschart A, Sunagawa S, Zeller G, Wilmes P, Bork P
2019 Feb 12; 8: . PubMed: 30747106.
Abstract + PDF
2017 1 publication(s).
4.
proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes.
2017 Jan 4; 45(D1): D529-D534. PubMed: 28053165.
Abstract + PDF
2016 2 publication(s).
3.
MOCAT2: a metagenomic assembly, annotation and profiling framework.
2016 Aug 15; 32(16): 2520-3. Epub 2016 Apr 8; PubMed: 27153620.
Abstract + PDF
2.
Durable coexistence of donor and recipient strains after fecal microbiota transplantation.
Li SS, Zhu A, Benes V, Costea PI, Hercog R, Hildebrand F, Huerta-Cepas J, Nieuwdorp M, Salojärvi J, Voigt AY, Zeller G, Sunagawa S, de Vos WM, Bork P
2016 Apr 29; 352(6285): 586-9. PubMed: 27126044.
Abstract + PDF
2015 1 publication(s).
1.
Temporal and technical variability of human gut metagenomes.
2015 Apr 8; 16(1): 73. Epub 2015 Apr 8; PubMed: 25888008.
Abstract + PDF