Publications of P. Bork in the journal "Microbiome".

Publications of P. Bork in the journal "Microbiome".

The individual publication lists here have to be considered only in the context of the Bork Group.
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2023 1 publication(s).
7.
Enterotypes of the human gut mycobiome.
Lai S, Yan Y, Pu Y, Lin S, Qiu JG, Jiang BH, Keller MI, Wang M, Bork P, Chen WH, Zheng Y, Zhao XM
Microbiome.
2023 Aug 11; 11(1): 179. PubMed: 37563687.
Abstract + PDF
2022 2 publication(s).
6.
Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integrated multi-omic analyses.
Kunath BJ, Hickl O, Queirós P, Martin-Gallausiaux C, Lebrun LA, Halder R, Laczny CC, Schmidt TSB, Hayward MR, Becher D, Heintz-Buschart A, de Beaufort C, Bork P, May P, Wilmes P
Microbiome.
2022 Dec 28; 10(1): 243. PubMed: 36578059.
Abstract + PDF
5.
Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments.
Ruscheweyh HJ, Milanese A, Paoli L, Karcher N, Clayssen Q, Keller MI, Wirbel J, Bork P, Mende DR, Zeller G, Sunagawa S
Microbiome.
2022 Dec 5; 10(1): 212. PubMed: 36464731.
Abstract + PDF
2019 1 publication(s).
4.
NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language.
Coelho LP, Alves RJ, Monteiro P, Huerta-Cepas J, Freitas AT, Bork P
Microbiome.
2019 Jun 3; 7(1): 84. PubMed: 31159881.
Abstract + PDF
2018 1 publication(s).
3.
Similarity of the dog and human gut microbiomes in gene content and response to diet.
Coelho LP, Kultima JR, Costea PI, Fournier C, Pan Y, Czarnecki-Maulden G, Hayward MR, Forslund SK, Schmidt TSB, Descombes P, Jackson JR, Li Q, Bork P
Microbiome.
2018 Apr 19; 6(1): 72. PubMed: 29669589.
Abstract + PDF
2014 2 publication(s).
2.
LotuS: an efficient and user-friendly OTU processing pipeline.
Hildebrand F, Tadeo R, Voigt AY, Bork P, Raes J
Microbiome.
2014 Sep 30; 2(1): 30. Epub 2014 Sep 30; PubMed: 27367037.
Abstract + PDF
1.
Correction: LotuS: an efficient and user-friendly OTU processing pipeline.
Hildebrand F, Tito RY, Voigt AY, Bork P, Raes J
Microbiome.
2014; 2: 37. PubMed: 25317332.
Abstract + PDF