3D images of MODULES in extracellular Proteins

   3D images of MODULES in extracellular Proteins

Here are GIF files showing 3D-molscript cartoons of selected modules in extracellular proteins prepared by Annalisa Pastore (EMBL). These images are also available in PostScript format for better printing quality. Questions/corrections/improvements should be directed to Annalisa Pastore or Peer Bork

(pastore@embl-heidelberg.de or Peer.Bork@embl.org).

Full names (5,2 letter abbreviations) ---> PDB code: source protein are given


anaphylatoxin               (ANATO,AT) ---> 1C5A: pig complement factor Va 
CCP [Sushi, SCR]            (CCP,  CP) ---> 1HFI: human factor H
C-type lectin [CTL]         (CLECT,CL) ---> 2MSB: rat mannose binding protein A
C-terminal cystine-knot     (CTCK, CK) ---> 1TGI: human TGF-beta 2
cystatin-like               (CYSTA,CY) ---> 1CEW: chicken cystatin 
cytokine receptor Nt        (CYTR, CR) ---> 3HHR: human growth hormone receptor
EGF-like                    (EGF,  EG) ---> 1EGF: mouse EGF
Follistatin-like            (FOLLI,FS) ---> 2OVO: silver pheasant ovomucoid
Fibronectin type-I          (FN1,  F1) ---> 1TPM: human tPA
Fibronectin type-II         (FN2,  F2) ---> 1PDC: bovine seminal fluid protein PDC 109
Fibronectin type-III        (FN3,  F3) ---> 1TTG: human fibronectin
Immunoglobulin "superfamily"(IGSF, IG)
Kringle                     (KRING,KR)
Kunitz/BPTI inhibitor       (KUNIT,KU) ---> 1SHP: sea anemone trypsin inhibitor
Ly6 antigen/uPA receptor    (LY6P, LU) ---> 1ERG: human complement regulatory protein CD59
TNF receptor family         (TNFRC,TR) ---> 1TNR: human tumor necrosis factor receptor p55
P-type [trefoil]            (PDOM, PD) ---> 1PSP: pig spasmolytic polypeptide (PSP)

Have a look at the nomenclature again or go back to 1D

Note that this is a test version!

Last modified April 10, 1996