promoter
| ID | Z-score | Known | Upstream promoter |
Gene | |
| 1 | BS0929 | -8.895 | |
glycerol-3-phosphate dehydrogenase (glpD) | |
| 2 | BS2825 | -8.473 | |
|
acetolactate synthase (acetohydroxy-acid synthase) (large subunit) (ilvB) |
| 3 | BS1310 | -6.836 | similar to chaperonin (ykkC) | ||
| 4 | BS0983 | -6.733 | |
hypothetical protein (yhaW) | |
| 5 | BS3920 | -6.468 | |
|
PTS beta-glucoside-specific enzyme IIABC component (bglP) |
| 6 | BS1257 | -6.332 | RNA polymerase PBSX sigma factor-like (xpf) | ||
| 7 | BS2733 | -6.238 | |
alanyl-tRNA synthetase (alaS) | |
| 8 | BS0013 | -6.126 | |
|
seryl-tRNA synthetase (serS) |
| 9 | BS2184 | -5.942 | |
similar to hypothetical proteins from B. subtilis (yphP) | |
| 10 | BS3966 | -5.840 | |
iolD; alternate gene name: yxdD (iolD) | |
| 11 | BS2749 | -5.839 | |
histidyl-tRNA synthetase (hisS) | |
| 12 | BS2520 | -5.815 | |
|
glycyl-tRNA synthetase (alpha subunit) (glyQ) |
| 13 | BS3396 | -5.767 | |
|
similar to amino acid permease (yvbW) |
| 14 | BS0215 | -5.526 | |
|
glycerol-3-phosphate permease (glpT) |
| 15 | BS2255 | -5.344 | hypothetical proteins (ypiA) | ||
| 16 | BS2600 | -5.342 | similar to phage-related protein (yqbK) | ||
| 17 | BS1544 | -5.239 | |
|
isoleucyl-tRNA synthetase (ileS) |
| 18 | BS3710 | -5.196 | |
CTP synthetase (ctrA) | |
| 19 | BS3895 | -5.191 | |
similar to pyrimidine nucleoside transport protein (yxjA) | |
| 20 | BS3798 | -5.164 | |
|
PTS sucrose-specific enzyme IIBC component (sacP) |
| 21 | BS2614 | -5.152 | |
hypothetical proteins (yqaQ) | |
| 22 | BS2484 | -5.148 | |
similar to 5-formyltetrahydrofolate cyclo-ligase (yqgN) | |
| 23 | BS1319 | -5.124 | |
|
cobalamin-independent methionine synthase (metC) |
| 24 | BS2682 | -4.990 | |
hypothetical proteins (yraL) | |
| 25 | BS3750 | -4.958 | |
|
threonyl-tRNA synthetase (thrZ) |
| 26 | BS0183 | -4.938 | |
NADH dehydrogenase (subunit 5) (ndhF) | |
| 27 | BS3440 | -4.890 | |
|
levansucrase (sacB) |
| 28 | BS2715 | -4.841 | |
similar to formate dehydrogenase (yrhE) | |
| 29 | BS2204 | -4.819 | |
|
xanthine phosphoribosyltransferase (xpt) |
| 30 | BS2139 | -4.756 | |
|
similar to N-acetylmuramoyl-L-alanine amidase (yomC) |
| 31 | BS2803 | -4.750 | |
|
valyl-tRNA synthetase (valS) |
| 32 | BS0093 | -4.747 | |
|
serine acetyltransferase (cysE) |
| 33 | BS3877 | -4.696 | |
hypothetical protein (yxkD) | |
| 34 | BS1357 | -4.680 | |
|
hypothetical protein (ykrT) |
| 35 | BS0178 | -4.675 | |
L-glutamine-D-fructose-6-phosphate amidotransferase (glmS) | |
| 36 | BS1658 | -4.644 | |
DNA polymerase III (alpha subunit) (polC) | |
| 37 | BS3894 | -4.630 | |
hypothetical proteins (yxjB) | |
| 38 | tRNA-Arg | -4.609 | tRNA-Arg (trnJ-Arg) | ||
| 39 | BS0535 | -4.505 | similar to antibiotic resistance protein (ydfB) | ||
| 40 | BS3839 | -4.472 | |
tyrosyl-tRNA synthetase (tyrZ) | |
| 41 | BS2961 | -4.430 | |
|
tyrosyl-tRNA synthetase (tyrS) |
| 42 | BS0441 | -4.399 | hypothetical protein (ydbB) | ||
| 43 | BS1143 | -4.382 | |
tryptophanyl-tRNA synthetase (trpS) | |
| 44 | BS1737 | -4.375 | |
similar to ribonucleoprotein (ymaA) | |
| 45 | BS0254 | -4.309 | |
|
hypothetical protein (yczA) |
| 46 | BS1971 | -4.297 | |
similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase (yodT) | |
| 47 | BS0643 | -4.279 | |
|
phosphoribosylaminoimidazole carboxylase I (purE) |
| 48 | BS3026 | -4.270 | |
|
leucyl-tRNA synthetase (leuS) |
| 49 | BS2889 | -4.249 | |
threonyl-tRNA synthetase (thrS) | |
| 50 | BS3690 | -4.191 | |
hypothetical proteins (ywlC) | |
| 51 | BS1188 | -4.176 | |
|
similar to cystathionine gamma-synthase (yjcI) |
| 52 | BS0521 | -4.158 | |
hypothetical protein (ydeI) | |
| 53 | BS2452 | -4.143 | |
similar to aminomethyltransferase (yqhI) | |
| 54 | BS3604 | -4.128 | |
hypothetical protein (ywrE) | |
| 55 | BS1313 | -4.086 | |
gamma-glutamyl kinase (proB) | |
| 56 | BS3269 | -3.989 | |
|
similar to ABC transporter (ATP-binding protein) (yusC) |
| 57 | BS0423 | -3.974 | |
hypothetical protein (ydaH) | |
| 58 | BS2504 | -3.896 | |
similar to transcriptional regulator (Fur family) (yqfV) | |
| 59 | BS3900 | -3.884 | |
|
endo-beta-1,3-1,4 glucanase (bglS) |
| 60 | BS0038 | -3.883 | |
|
methionyl-tRNA synthetase (metS) |
| 61 | BS2319 | -3.879 | |
hypothetical protein (ypuF) | |
| 62 | BS1683 | -3.845 | similar to phage-related protein (ymfE) | ||
| 63 | BS1881 | -3.805 | |
phosphoenolpyruvate synthase (pps) | |
| 64 | BS3513 | -3.805 | |
putative membrane protein (csbA) | |
| 65 | BS0432 | -3.796 | hypothetical protein (ydaO) | ||
| 66 | BS3355 | -3.795 | hypothetical protein (yvaI) | ||
| 67 | BS2858 | -3.784 | |
|
phenylalanyl-tRNA synthetase (alpha subunit) (pheS) |
| 68 | BS3668 | -3.780 | |
hypothetical protein (ywmD) | |
| 69 | BS0927 | -3.776 | |
glycerol uptake facilitator (glpF) | |
| 70 | BS0281 | -3.739 | |
hypothetical protein (ycdC) | |
| 71 | BS2306 | -3.714 | RNA polymerase ECF-type sigma factor (sigma-X) (sigX) | ||
| 72 | BS0143 | -3.709 | |
RNA polymerase (alpha subunit) (rpoA) | |
| 73 | BS0449 | -3.687 | |
similar to ABC transporter (ATP-binding protein) (ydbJ) | |
| 74 | BS1094 | -3.668 | |
hypothetical protein (yitC) | |
| 75 | BS1370 | -3.645 | |
motility protein A (motA) | |
| 76 | BS3785 | -3.618 | |
hypothetical protein (ywdL) | |
| 77 | BS0104 | -3.612 | |
ribosomal protein L10 (BL5) (rplJ) | |
| 78 | BS3313 | -3.584 | similar to iron-binding protein (yvrC) | ||
| 79 | BS0716 | -3.572 | |
hypothetical protein (yetH) | |
| 80 | BS1889 | -3.524 | |
response regulator aspartate phosphatase (rapK) | |
| 81 | BS0673 | -3.492 | hypothetical protein (yerQ) | ||
| 82 | BS0002 | -3.480 | DNA polymerase III (beta subunit) (dnaN) | ||
| 83 | BS0880 | -3.473 | |
transcriptional regulator (senS) | |
| 84 | BS1548 | -3.473 | |
|
transcriptional attenuator and uracil phosphoribosyltransferase activity (minor) (pyrR) |
| 85 | BS1409 | -3.467 | |
hypothetical protein (ykuH) | |
| 86 | BS2881 | -3.464 | initiation factor IF-3 (infC) | ||
| 87 | BS1651 | -3.412 | uridylate kinase (smbA) | ||
| 88 | BS3888 | -3.412 | |
|
hypothetical protein (yxjH) |
| 89 | BS3889 | -3.412 | |
|
hypothetical protein (yxjG) |
| 90 | BS0925 | -3.407 | |
similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase (yhxA) | |
| 91 | BS1205 | -3.351 | hypothetical protein (yjdG) | ||
| 92 | BS3784 | -3.335 | hypothetical protein (spsA) | ||
| 93 | BS3093 | -3.325 | |
hypothetical protein (yuaJ) | |
| 94 | BS1470 | -3.265 | |
hypothetical protein (yktD) | |
| 95 | BS1549 | -3.265 | |
uracil permease (pyrP) | |
| 96 | BS2841 | -3.262 | |
aspartokinase II (lysC) | |
| 97 | BS2903 | -3.222 | DNA polymerase I (polA) | ||
| 98 | BS3446 | -3.202 | |
hypothetical protein (yvdQ) | |
| 99 | BS2984 | -3.202 | hypothetical protein (ytmQ) | ||
| 100 | BS1920 | -3.201 | |
similar to ATP-dependent DNA helicase (yocI) | |
| 101 | BS3343 | -3.192 | |
hypothetical protein (yvgV) | |
| 102 | BS3731 | -3.192 | |
hypothetical protein (ywiA) | |
| 103 | BS3278 | -3.188 | similar to 3-hydroxyacyl-CoA dehydrogenase (yusL) | ||
| 104 | BS3412 | -3.180 | transcriptional regulator (LacI family) (lacR) | ||
| 105 | BS2278 | -3.156 | hypothetical protein (yphE) | ||
| 106 | BS3914 | -3.141 | |
hypothetical protein (yxiF) | |
| 107 | BS1550 | -3.120 | |
|
aspartate carbamoyltransferase (pyrB) |
| 108 | BS0878 | -3.120 | |
thiA (thiA) | |
| 109 | BS2775 | -3.111 | |
similar to sodium/proton-dependent alanine carrier protein (yrbD) | |
| 110 | BS1673 | -3.111 | dipicolinate synthase subunit A (spoVFA) | ||
| 111 | BS2569 | -3.086 | |
site-specific DNA recombinase (spoIVCA) | |
| 112 | BS2713 | -3.075 | |
similar to formate dehydrogenase (yrhG) | |
| 113 | BS2539 | -3.075 | heat-shock protein (dnaJ) | ||
| 114 | BS3719 | -3.068 | similar to cardiolipin synthetase (ywiE) | ||
| 115 | BS2711 | -3.061 | |
similar to methyltransferase (yrhH) | |
| 116 | BS1166 | -3.059 | |
transcriptional regulator (tenA) | |
| 117 | BS1446 | -3.057 | aminopeptidase (ampS) | ||
| 118 | BS0503 | -3.033 | |
hypothetical protein (yddM) | |
| 119 | BS1455 | -3.014 | |
hypothetical protein (ykzG) | |
| 120 | BS3164 | -2.969 | |
transcriptional regulator (comQ) | |
| 121 | BS1360 | -2.966 | |
|
similar to ribulose-bisphosphate carboxylase (ykrW) |
| 122 | BS1536 | -2.942 | |
similar to acetylornithine deacetylase (ylmB) | |
| 123 | BS3133 | -2.940 | |
similar to polyribonucleotide nucleotidyltransferase (yugI) | |
| 124 | BS3635 | -2.930 | |
flagellar basal-body rod protein (flhO) | |
| 125 | BS1659 | -2.908 | |
hypothetical protein (ylxS) | |
| 126 | BS2216 | -2.896 | hypothetical protein (ypsA) | ||
| 127 | BS0115 | -2.894 | |
ribosomal protein S10 (BS13) (rpsJ) | |
| 128 | BS0637 | -2.878 | |
hypothetical protein (yebB) | |
| 129 | BS2627 | -2.867 | similar to transcriptional regulator (phage-related) (Xre family) (yqaE) | ||
| 130 | BS0745 | -2.856 | |
similar to quinone oxidoreductase (yfmJ) | |
| 131 | BS1785 | -2.852 | transcriptional regulator (lexA) | ||
| 132 | BS1737 | -2.805 | |
similar to ribonucleoprotein (ymaA) | |
| 133 | BS1525 | -2.800 | |
cell-division initiation protein (divIB) | |
| 134 | BS2138 | -2.782 | hypothetical protein (yomD) | ||
| 135 | BS2162 | -2.776 | |
hypothetical protein (yokC) | |
| 136 | BS1335 | -2.740 | |
similar to transcriptional regulator (MarR family) (ykoM) | |
| 137 | BS0241 | -2.658 | |
similar to histidine permease (ybgF) | |
| 138 | BS2715 | -2.649 | |
similar to formate dehydrogenase (yrhE) | |
| 139 | BS1855 | -2.649 | |
|
similar to phosphoglycerate dehydrogenase (yoaD) |
| 140 | BS2986 | -2.643 | |
hypothetical protein (ytmP) | |
| 141 | BS1321 | -2.642 | hypothetical protein (ispU) | ||
| 142 | BS0386 | -2.640 | |
similar to transcriptional regulator (TetR/AcrR family) (ycnC) | |
| 143 | BS2425 | -2.616 | similar to exodeoxyribonuclease VII (large subunit) (yqiB) | ||
| 144 | BS0057 | -2.589 | similar to amino acid transporter (yabM) | ||
| 145 | BS3957 | -2.586 | similar to ABC transporter (ATP-binding protein) (yxdL) | ||
| 146 | BS1003 | -2.585 | |
Hit-like protein (hit) | |
| 147 | BS3350 | -2.580 | hypothetical protein (yvaC) | ||
| 148 | BS1659 | -2.573 | |
hypothetical protein (ylxS) | |
| 149 | BS4050 | -2.567 | |
hypothetical protein (yybP) | |
| 150 | BS2617 | -2.559 | |
hypothetical protein (yqaN) | |
| 151 | BS0806 | -2.555 | |
acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) (acoA) | |
| 152 | BS0636 | -2.553 | |
GMP synthetase (guaA) | |
| 153 | BS1871 | -2.546 | |
hypothetical protein (yoaS) | |
| 154 | BS2152 | -2.537 | |
hypothetical protein (yolA) | |
| 155 | BS1490 | -2.535 | |
cytochrome caa3 oxidase (subunit II) (ctaC) | |
| 156 | BS3210 | -2.518 | transcriptional regulator (paiA) | ||
| 157 | BS0558 | -2.516 | |
hypothetical protein (ydgC) | |
| 158 | BS1585 | -2.516 | similar to phosphoglycerate dehydrogenase (yloW) | ||
| 159 | BS3625 | -2.513 | transcriptional regulator (DeoR family) (glcR) | ||
| 160 | BS2512 | -2.483 | |
hypothetical protein (yqfN) | |
| 161 | BS0164 | -2.480 | similar to transcriptional regulator (AraC/XylS family) (ybbB) | ||
| 162 | BS2895 | -2.471 | |
hypothetical protein (ytcF) | |
| 163 | BS2632 | -2.456 | |
hypothetical protein (yrkS) | |
| 164 | BS0804 | -2.447 | |
hypothetical protein (yfjM) | |
| 165 | BS0632 | -2.404 | |
similar to cation efflux system membrane protein (yeaB) | |
| 166 | BS2632 | -2.392 | |
hypotheitcal protein (yrkS) | |
| 167 | BS2713 | -2.387 | |
similar to formate dehydrogenase (yrhG) | |
| 168 | BS0561 | -2.386 | |
ATP-binding transport protein (expZ) | |
| 169 | BS1373 | -2.372 | |
hypothetical protein (ykvJ) | |
| 170 | BS0888 | -2.371 | |
hypothetical protein (ygaO) | |
| 171 | BS2239 | -2.369 | ketopantoate hydroxymethyltransferase (panB) | ||
| 172 | BS2746 | -2.356 | |
hypothetical protein (yrvN) | |
| 173 | BS3568 | -2.347 | UDP-glucose:polyglycerol phosphate glucosyltransferase (tagE) | ||
| 174 | BS4087 | -2.342 | |
similar to formate dehydrogenase (yyaE) | |
| 175 | BS0745 | -2.309 | |
similar to quinone oxidoreductase (yfmJ) | |
| 176 | BS3473 | -2.308 | |
similar to mutator MutT protein (yvcI) | |
| 177 | BS2596 | -2.308 | |
similar to phage-related protein (yqbN) | |
| 178 | BS1319 | -2.296 | |
cobalamin-independent methionine synthase (metC) | |
| 179 | BS1472 | -2.294 | |
hypothetical protein (ylaA) | |
| 180 | BS3265 | -2.287 | |
similar to ABC transporter (ATP-binding protein) (yurY) | |
| 181 | BS3666 | -2.250 | required for formate dehydrogenase activity (narQ) | ||
| 182 | BS2225 | -2.236 | |
hypothetical protein (yppD) | |
| 183 | BS3000 | -2.232 | |
hypothetical protein (ytfP) | |
| 184 | BS1181 | -2.230 | |
hypothetical protein (yjcB) | |
| 185 | BS1735 | -2.220 | hypothetical protein (ymzC) | ||
| 186 | BS0668 | -2.210 | |
hypothetical protein (yerL) | |
| 187 | BS1065 | -2.204 | similar to DNA exonuclease (yirY) | ||
| 188 | BS3199 | -2.201 | |
hypothetical protein (yuiF) | |
| 189 | BS1302 | -2.182 | hypothetical protein (ykgB) | ||
| 190 | BS2921 | -2.181 | hypothetical protein (ytoI) | ||
| 191 | BS3142 | -2.171 | |
similar to multidrug-efflux transporter (yuxJ) | |
| 192 | BS2729 | -2.163 | |
similar to caffeoyl-CoA O-methyltransferase (yrrM) | |
| 193 | BS0313 | -2.157 | hypothetical protein (ycgI) | ||
| 194 | BS3278 | -2.157 | similar to 3-hydroxyacyl-CoA dehydrogenase (yusL) | ||
| 195 | BS1386 | -2.151 | |
similar to heavy metal-transporting ATPase (ykvW) | |
| 196 | BS0245 | -2.139 | |
similar to two-component sensor histidine kinase [YcbB] (ycbA) | |
| 197 | BS3196 | -2.124 | |
hypothetical protein (yuiI) | |
| 198 | BS0826 | -2.115 | |
similar to metabolite transport protein (yfiG) | |
| 199 | BS1536 | -2.115 | |
similar to acetylornithine deacetylase (ylmB) | |
| 200 | BS1142 | -2.104 | hypothetical protein (yjbA) | ||
| 201 | BS2376 | -2.057 | |
|
similar to pyrroline-5-carboxylate reductase (yqjO) |
| 202 | BS2920 | -2.018 | hypothetical protein (ytpI) | ||
| 203 | BS1878 | -2.018 | beta-lactamase precursor (penP) |