promoter
| ID | Z-score | Known | Upstream promoter |
Gene | |
| 1 | b4119 | -9.279 | alpha-galactosidase (melA) | ||
| 2 | b2019 | -7.560 | |
|
ATP phosphoribosyltransferase (hisG) |
| 3 | b3828 | -7.143 | regulator for metE and metH (metR) | ||
| 4 | b3543 | -7.009 | dipeptide transport system permease protein 1 (dppB) | ||
| 5 | b4118 | -6.911 | regulator of melibiose operon (melR) | ||
| 6 | b2425 | -6.168 | |
thiosulfate binding protein (cysP) | |
| 7 | b0560 | -5.838 | |
bacteriophage DNA packaging protein (nohB) | |
| 8 | b4385 | -5.755 | hypothetical protein (yjjJ) | ||
| 9 | b3866 | -5.703 | hypothetical protein (yihI) | ||
| 10 | b0689 | -5.697 | putative pectinase (ybfP) | ||
| 11 | b1548 | -5.638 | |
homolog of Qin prophage packaging protein NU1 (nohA) | |
| 12 | b1825 | -5.573 | |
hypothetical protein | |
| 13 | b0611 | -5.528 | RNase I, cleaves phosphodiester bond between any two nucleotides (rna) | ||
| 14 | b2622 | -5.470 | prophage CP4-57 integrase (intA) | ||
| 15 | b3066 | -5.002 | DNA biosynthesis; DNA primase (dnaG) | ||
| 16 | b0654 | -4.844 | glutamate/aspartate transport system permease (gltJ) | ||
| 17 | b1978 | -4.772 | |
putative factor | |
| 18 | b3767 | -4.529 | |
acetolactate synthase II, large subunit, cryptic, interrupted (ilvG_1) | |
| 19 | b2119 | -4.518 | |
hypothetical protein (yehL) | |
| 20 | b2792 | -4.444 | hypothetical protein | ||
| 21 | b0902 | -4.443 | |
pyruvate formate lyase activating enzyme 1 (pflA) | |
| 22 | b3871 | -4.352 | |
putative GTP-binding factor (yihK) | |
| 23 | b2937 | -4.347 | |
agmatinase (speB) | |
| 24 | b0939 | -4.300 | putative chaperone (ycbR) | ||
| 25 | b1431 | -4.280 | |
hypothetical protein | |
| 26 | b0890 | -4.275 | cell division protein (ftsK) | ||
| 27 | b2632 | -4.177 | |
putative GTP-binding protein (yfjP) | |
| 28 | b0048 | -4.168 | |
dihydrofolate reductase type I (folA) | |
| 29 | b0336 | -4.133 | cytosine permease/transport (codB) | ||
| 30 | b2517 | -4.076 | |
hypothetical protein (yfgB) | |
| 31 | b3438 | -4.018 | regulator of gluconate (gnt) operon (gntR) | ||
| 32 | b2599 | -3.945 | |
|
chorismate mutase-P and prephenate dehydratase (pheA) |
| 33 | b3671 | -3.923 | |
|
acetolactate synthase I, valine-sensitive, large subunit (ilvB) |
| 34 | b2775 | -3.907 | |
putative transport protein (yqcE) | |
| 35 | b2609 | -3.891 | |
30S ribosomal subunit protein S16 (rpsP) | |
| 36 | b3181 | -3.889 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (greA) | ||
| 37 | b3983 | -3.861 | |
50S ribosomal subunit protein L11 (rplK) | |
| 38 | b3722 | -3.823 | |
PTS beta-glucosides enzyme II, cryptic (bglF) | |
| 39 | b0002 | -3.788 | |
|
aspartokinase I, homoserine dehydrogenase I (thrA) |
| 40 | b0196 | -3.759 | regulator in colanic acid synthesis; interacts with RcsB (rcsF) | ||
| 41 | b0007 | -3.711 | inner membrane transport protein (yaaJ) | ||
| 42 | b3513 | -3.694 | putative membrane protein (yhiU) | ||
| 43 | b3088 | -3.669 | |
putative transport protein (ygjT) | |
| 44 | b4178 | -3.630 | |
hypothetical protein (yjeB) | |
| 45 | b3752 | -3.573 | |
ribokinase (rbsK) | |
| 46 | b2643 | -3.572 | hypothetical protein (yfjX) | ||
| 47 | b0074 | -3.559 | |
|
2-isopropylmalate synthase (leuA) |
| 48 | b2096 | -3.530 | |
tagatose-bisphosphate aldolase 1 (gatY) | |
| 49 | b0170 | -3.506 | |
|
elongation factor EF-Ts (tsf) |
| 50 | b0610 | -3.506 | |
regulator of nucleoside diphosphate kinase (rnk) | |
| 51 | b3813 | -3.503 | |
DNA-dependent ATPase I and helicase II (uvrD) | |
| 52 | b1851 | -3.446 | 6-phosphogluconate dehydratase (edd) | ||
| 53 | b2359 | -3.395 | |
hypothetical protein | |
| 54 | b4245 | -3.387 | |
aspartate carbamoyltransferase, catalytic subunit (pyrB) | |
| 55 | b4377 | -3.374 | |
hypothetical protein (yjjU) | |
| 56 | b3298 | -3.362 | |
30S ribosomal subunit protein S13 (rpsM) | |
| 57 | b0606 | -3.358 | alkyl hydroperoxide reductase, F52a subunit (ahpF) | ||
| 58 | b0018 | -3.350 | |
Gef protein interferes with membrane function when in excess (gef) | |
| 59 | b2958 | -3.329 | hypothetical protein (yggN) | ||
| 60 | b3822 | -3.303 | ATP-dependent DNA helicase (recQ) | ||
| 61 | b0241 | -3.292 | outer membrane pore protein E (phoE) | ||
| 62 | b0680 | -3.260 | glutamine tRNA synthetase (glnS) | ||
| 63 | b0404 | -3.233 | putative glycoprotein (yajB) | ||
| 64 | b3337 | -3.232 | |
hypothetical protein (yheA) | |
| 65 | b3190 | -3.181 | hypothetical protein (yrbA) | ||
| 66 | b0860 | -3.147 | arginine 3rd transport system periplasmic binding protein (artJ) | ||
| 67 | b1922 | -3.115 | |
flagellar biosynthesis; regulation of flagellar operons (fliA) | |
| 68 | b2836 | -3.103 | 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase (aas) | ||
| 69 | b3915 | -3.087 | putative transport system permease protein (yiiP) | ||
| 70 | b3310 | -3.083 | |
50S ribosomal subunit protein L14 (rplN) | |
| 71 | b0119 | -3.018 | hypothetical protein (yacL) | ||
| 72 | b3748 | -3.005 | D-ribose high-affinity transport system; membrane-associated protein (rbsD) | ||
| 73 | b2313 | -2.990 | |
membrane protein required for colicin V production (cvpA) | |
| 74 | b1352 | -2.967 | |
hypothetical protein (ydaD) | |
| 75 | b0441 | -2.961 | putative protease maturation protein (ybaU) | ||
| 76 | b3161 | -2.947 | tryptophan-specific transport protein (mtr) | ||
| 77 | b1614 | -2.888 | |
hypothetical protein (ydgA) | |
| 78 | b3528 | -2.862 | |
uptake of C4-dicarboxylic acids (dctA) | |
| 79 | b2514 | -2.812 | |
histidine tRNA synthetase (hisS) | |
| 80 | b3390 | -2.810 | |
shikimate kinase I (aroK) | |
| 81 | b1253 | -2.808 | hypothetical protein (yciA) | ||
| 82 | b2724 | -2.808 | |
probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) (hycB) | |
| 83 | b4242 | -2.806 | Mg2+ transport ATPase, P-type 1 (mgtA) | ||
| 84 | b0208 | -2.804 | putative transcriptional regulator LYSR-type (yafC) | ||
| 85 | b1479 | -2.790 | |
NAD-linked malate dehydrogenase (malic enzyme) (sfcA) | |
| 86 | b1838 | -2.749 | |
protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (pphA) | |
| 87 | b0189 | -2.741 | |
hypothetical protein (yaeO) | |
| 88 | b1264 | -2.717 | |
anthranilate synthase component I (trpE) | |
| 89 | b4313 | -2.706 | |
recombinase involved in phase variation; regulator for fimA (fimE) | |
| 90 | b3573 | -2.691 | hypothetical protein (yiaI) | ||
| 91 | b3642 | -2.675 | |
orotate phosphoribosyltransferase (pyrE) | |
| 92 | b0034 | -2.646 | |
transcriptional regulator of cai operon (caiF) | |
| 93 | b2176 | -2.635 | hypothetical protein (rtn) | ||
| 94 | b1769 | -2.618 | putative transport protein (ydjE) | ||
| 95 | b1561 | -2.605 | hypothetical protein (rem) | ||
| 96 | b1050 | -2.605 | hypothetical protein (yceK) | ||
| 97 | b2643 | -2.604 | hypothetical protein (yfjX) | ||
| 98 | b0248 | -2.604 | hypothetical protein (yafX) | ||
| 99 | b4278 | -2.591 | |
IS4 hypothetical protein (yi41) | |
| 100 | b3560 | -2.583 | glycine tRNA synthetase, alpha subunit (glyQ) | ||
| 101 | b3723 | -2.565 | |
|
positive regulation of bgl operon (bglG) |
| 102 | b1689 | -2.560 | |
hypothetical protein | |
| 103 | b3632 | -2.528 | |
lipopolysaccharide core biosynthesis (rfaQ) | |
| 104 | b1404 | -2.521 | |
IS30 transposase (tra8_2) | |
| 105 | b2014 | -2.519 | |
putative amino acid/amine transport protein (yeeF) | |
| 106 | b2924 | -2.487 | putative transport protein (yggB) | ||
| 107 | b0070 | -2.433 | |
putative transport protein (yabM) | |
| 108 | b4037 | -2.409 | |
periplasmic protein of mal regulon (malM) | |
| 109 | b2359 | -2.405 | hypothetical protein | ||
| 110 | b3571 | -2.393 | |
alpha-amylase (malS) | |
| 111 | b4082 | -2.370 | putative membrane protein (yjcR) | ||
| 112 | b0174 | -2.360 | |
hypothetical protein (yaeS) | |
| 113 | b4392 | -2.359 | soluble lytic murein transglycosylase (slt) | ||
| 114 | b2938 | -2.347 | |
biosynthetic arginine decarboxylase (speA) | |
| 115 | b2443 | -2.331 | |
hypothetical protein | |
| 116 | b4090 | -2.296 | |
ribose 5-phosphate isomerase B (rpiB) | |
| 117 | b2140 | -2.289 | |
putative regulator protein (yohI) | |
| 118 | b1861 | -2.274 | |
Holliday junction helicase subunit B (ruvA) | |
| 119 | b3196 | -2.274 | |
hypothetical protein (yrbG) | |
| 120 | b3054 | -2.268 | hypothetical protein (ygiF) | ||
| 121 | b1761 | -2.252 | NADP-specific glutamate dehydrogenase (gdhA) | ||
| 122 | b0763 | -2.248 | |
molybdate-binding periplasmic protein; permease (modA) | |
| 123 | b0909 | -2.234 | putative heat shock protein (ycaL) | ||
| 124 | b3954 | -2.233 | |
putative ARAC-type regulatory protein (yijO) | |
| 125 | b3440 | -2.232 | |
putative regulator (yhhX) | |
| 126 | b3074 | -2.225 | putative tRNA synthetase (ygjH) | ||
| 127 | b0605 | -2.218 | |
alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides (ahpC) | |
| 128 | b1053 | -2.218 | putative transport protein (yceE) | ||
| 129 | b1284 | -2.210 | |
putative DEOR-type transcriptional regulator | |
| 130 | b0068 | -2.206 | thiamin-binding periplasmic protein (tbpA) | ||
| 131 | b0681 | -2.204 | hypothetical protein (ybfM) | ||
| 132 | b2150 | -2.158 | |
galactose-binding transport protein; receptor for galactose taxis (mglB) | |
| 133 | b3349 | -2.153 | |
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (slyD) | |
| 134 | b2298 | -2.148 | putative S-transferase (yfcC) | ||
| 135 | b0554 | -2.133 | |
hypothetical protein (ybcR) | |
| 136 | b1778 | -2.121 | hypothetical protein (yeaA) | ||
| 137 | b1829 | -2.092 | |
heat shock protein, integral membrane protein (htpX) | |
| 138 | b2685 | -2.084 | multidrug resistance secretion protein (emrA) | ||
| 139 | b2456 | -2.069 | detox protein (cchB) | ||
| 140 | b4284 | -2.067 | |
IS30 transposase (tra8_3) | |
| 141 | b1002 | -2.064 | |
periplasmic glucose-1-phosphatase (agp) | |
| 142 | b0854 | -2.059 | |
periplasmic putrescine-binding protein; permease protein (potF) | |
| 143 | b1368 | -2.051 | putative alpha helix protein | ||
| 144 | b3088 | -2.048 | |
putative transport protein (ygjT) | |
| 145 | b0347 | -2.019 | |
3-(3-hydroxyphenyl)propionate hydroxylase (mhpA) | |
| 146 | b1663 | -2.018 | |
putative transport protein (ydhE) |