summarizeSamples.pl - Generate HTML report of the samples in a metagenome collection.
summarizeSamples.pl [options]
--collection--helpWhatever!
SmashCommunity is part of the SMASH family of tools. Currently it consists of SmashCommunity for metagenomic annotation and analysis (including comparative metagenomic analysis), and SmashCell for high-throughput single-cell amplified microbial genomes
SmashCommunity is licensed under Creative Commons License.
Please cite us if you use SmashCommunity for your publications:
Arumugam, M., Harrington, E. D., Foerstner, K. U., Raes, J. and P. Bork. (2010) SmashCommunity: A metagenomic annotation and analysis tool, Bioinformatics, 26, 2977-8.