Smash scripts
- addMetaGenome
- addMetaGenome
- addMetaGenomeCollection
- addMetaGenomeCollection
- addRefGenomeSequences
- addRefGenomeSequences
- compareSamples
- compareSamples
- doAssembly
- doAssembly
- doComparativeAnalysis
- doComparativeAnalysis
- doGenePrediction
- doGenePrediction
- doKeggMapping
- doKeggMapping
- doOrthologMapping
- doOrthologMapping
- downsampleAnalysis
- downsampleAnalysis
- fetchMicrobialSequences
- fetchMicrobialSequences
- fetchWGSRecords
- fetchWGSRecords
- find16S
- find16S
- initSmash
- initSmash
- installSoftware
- installSoftware
- iTOL_downloader
- iTOL_downloader
- iTOL_uploader
- iTOL_uploader
- loadAssembly
- loadAssembly
- loadExternalAssembly
- loadExternalAssembly
- loadGenePrediction
- loadGenePrediction
- loadMetaGenome
- loadMetaGenome
- loadOrthologMapping
- loadOrthologMapping
- makeFakeAssembly
- makeFakeAssembly
- mpblast
- mpblast
- runBatch
- runBatch
- runBlast
- runBlast
- runParallelBlast
- runParallelBlast
- submitJobs
- submitJobs
- summarizeSamples
- summarizeSamples