STEP 15

Visualizing effect size estimations of sex- and diet on specific complexes

In this step the estimations calculated in Step12 are visualized in Figure 6b. The visualization allows assessing the distribution of sex- and diet-dependent effect sizes on all complexes (with ≥5 protein members), also highlighting effects on abundances and darker colors effects on stoichiometry.

Data/Code Requirements for downloading

gygi3_complex_quant_diet_data_all_multi_covariate_subunitSpecific_empiricalFDR.tsv.gz (169KB)

output file from multi-variate analysis (co-variate: diet), summarizing R2 for module subunit abundances

gygi3_complex_quant_sex_data_all_multi_covariate_subunitSpecific_empiricalFDR.tsv.gz (171KB)

output file from multi-variate analysis (co-variate: sex), summarizing R2 for module subunit abundances

gygi3_complex_stoichiometry_diet_data_all_multi_covariate_subunitSpecific_empiricalFDR.tsv.gz (167KB)

output file from multi-variate analysis (co-variate: diet), summarizing R2 for module subunit stoichiometries

gygi3_complex_stoichiometry_sex_data_all_multi_covariate_subunitSpecific_empiricalFDR.tsv.gz (169KB)

output file from multi-variate analysis (co-variate: sex), summarizing R2 for module subunit stoichiometries

Download all input data for this step here (677KB)

wp_step15_code.py

Python code required for visualizing more detailed effect sizes of genetic sex and diet per complex

output_step15.zip (12KB)

underlying data for Figure 6c

Figure 6c